Lytechinus variegatus (Green sea urchin, NC3) (Lvar_3.0)

Lytechinus variegatus (Green sea urchin, NC3) Assembly and Gene Annotation

About Lytechinus variegatus

Lytechinus variegatus, commonly called the green sea urchin (Lytechinus variegatus) or the variegated sea urchin, is a species of sea urchin that can be found in the warm waters of the western Atlantic Ocean and Caribbean Sea.

Picture credit: Creative Commons Attribution-Share Alike 4.0 via Wikimedia Commons (Image source)

Taxonomy ID 7654

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_018143015.1].

The total length of the assembly is 869598128 bp contained within 33 scaffolds. The scaffold N50 value is 45571165, the scaffold L50 value is 7. Assembly gaps span 181000 bp. The GC% content of the assembly is 0.0%.

Annotation

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyLvar_3.0, INSDC Assembly GCA_018143015.1,
Database version113.1
Golden Path Length869,598,128
Genebuild byNCBI
Genebuild methodImport
Data sourceDuke University

Gene counts

Coding genes22,667
Non coding genes3,647
Small non coding genes1,311
Long non coding genes2,335
Misc non coding genes1
Pseudogenes500
Gene transcripts38,709