Lytechinus variegatus (Green sea urchin, NC3) Assembly and Gene Annotation
About Lytechinus variegatus
Lytechinus variegatus, commonly called the green sea urchin (Lytechinus variegatus) or the variegated sea urchin, is a species of sea urchin that can be found in the warm waters of the western Atlantic Ocean and Caribbean Sea.
Picture credit: Creative Commons Attribution-Share Alike 4.0 via Wikimedia Commons (Image source)
Taxonomy ID 7654
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_018143015.1].
The total length of the assembly is 869598128 bp contained within 33 scaffolds. The scaffold N50 value is 45571165, the scaffold L50 value is 7. Assembly gaps span 181000 bp. The GC% content of the assembly is 0.0%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | Lvar_3.0, INSDC Assembly GCA_018143015.1, |
Database version | 113.1 |
Golden Path Length | 869,598,128 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Duke University |
Gene counts
Coding genes | 22,667 |
Non coding genes | 3,647 |
Small non coding genes | 1,311 |
Long non coding genes | 2,335 |
Misc non coding genes | 1 |
Pseudogenes | 500 |
Gene transcripts | 38,709 |