Neodiprion lecontei (Redheaded pine sawfly, iyNeoLeco1) (iyNeoLeco1.1)
Description

xanthine dehydrogenase/oxidase, transcript variant X9

About this transcript

This transcript has 24 exons and is annotated with 31 domains and features.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-XM_046742241.143101277aa
 
Protein coding
-Ensembl Canonical
-XM_046742246.148141226aa
 
Protein coding
--
-XM_046742243.143201256aa
 
Protein coding
--
-XM_046742242.142951272aa
 
Protein coding
--
-XM_015654685.242891270aa
 
Protein coding
A0A6J0B7L8 -
-XM_046742245.142751226aa
 
Protein coding
--
-XM_046742244.142051242aa
 
Protein coding
--
-XM_046742247.138041147aa
 
Protein coding
--
-XM_046742248.136241109aa
 
Protein coding
--
-XR_006904771.13557No protein
 
misc RNA
--
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • Intron sequence
  • UTR
Markup
  • loading
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  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........aatacagcgctcgcaccgcccgttcaacacgggtataaatgctaggcgca
1XM_046742242.1-E136,361,56036,361,716-2157
TCACGCGCCCAGCAGCAATACATACGGTTGTCATGTTTGCTAGCAGGACGTGTATCCCTG
CGCTTGTTTCTTCGAGTCTTCTCATTTTTTCGTTAATTCTCGAGTAACAATCATATCAAC
GAGATCCAAAAATGGGTGGACTATCAAGCTGTGATAG                       
 Intron 1-236,361,71736,362,008292
gtgagaagtatataccggcccgact..........gatttcattttctcttccgttacag
2XM_046742242.1-E236,362,00936,362,0582150
CGAATTTCAAGATACAGTGGCCTTCACCATAAATGGCGTGCCGTATACAG          
 Intron 2-336,362,05936,364,3942,336
gttggtaattacgaaaggagttcct..........cgaattaacgaactgcatcccttag
3XM_046742242.1-E336,364,39536,364,57512181
TTGACGAAAGTACACCATCTGGCACATCATTGAACGTATACCTTCGCGAGCATGCAAACC
TCCGGGGCACTAAAGCTATGTGCCTCGAGGGTGGGTGCGGAGTATGCATTGTGGCCGTGA
ATATTGGCGGCAATACAATGGCAGTCAACTCCTGTCTGGTTCCCATTCTAATCTGTCATG
G                                                           
 Intron 3-436,364,57636,364,744169
gtgagtgtaaaactatactagaatg..........tcagctttttgttcttgaatggtag
4XM_046742242.1-E436,364,74536,364,87622132
GTGGGAAATTACGACGATAGAAGGCGTAGGCAACCGCGGCTCGGGGTACCACCCGGTGCA
AGCAAGATTGGCCCAATTTAATGGTTCGCAATGTGGTTATTGCTCACCTGGGATGGTTAT
GAATATGTACAG                                                
 Intron 4-536,364,87736,364,983107
gtaatgatgatttacacgctgtcac..........tatgtgtcggttccaattgttctag
5XM_046742242.1-E536,364,98436,365,12820145
CTTGTCGCGGGAAAAAAAACAGCCGACAATGAAGGATGTTGAAAACTCGTTTGGAGGTAA
CATATGTAGGTGCACTGGGTACAGACCGATTCTAGATGCTTTTAAGTCACTCGCGTCAGA
CGCTAATTTGGAATTAACACAGAAG                                   
 Intron 5-636,365,12936,365,233105
gttcgagacattgaggtgaaatacg..........atgaaggatgaaaatatgtttgtag
6XM_046742242.1-E636,365,23436,365,44401211
GAGTTGTGTGACATAAAGGTTTGTTCAAAAACCGAGCAAAGCTGCAGCGGTTCGTGCGCA
ACGATACAAAAGAGCAAAGGCATCGGGTTTCGGCACATAATATTTGACAATGCTGAGTTC
TACAAAGTTCCTACCGTAGACGGGTTGTTTTCGATTTTTGAGAAATATCCTGACGCAAGC
TACGTTCTTCACGGTGGCAATACAGCTCATG                             
 Intron 6-736,365,44536,365,51874
gtgatgatacagcaaacaactgccg..........ataatcgcagtttttgtatttttag
7XM_046742242.1-E736,365,51936,365,73910221
GAGTATACAGGAGTAAGAAGTCTCAGCTTTACATCGATGTGAATGATATACCTGATTTGC
ACCGGGTCGAGTTAACCAAGATCGGTTTGGCATTTGGCGCTAACTTAACACTGACGAAAG
CCATGCAGAGTTTTAAGAAATATTCAACCTACAAGGGATTCAAATATTTGAATCTGTTAG
CGGATCATATCGATCTGATCGCTAGTGTCCCCGTACGCAAC                   
 Intron 7-836,365,74036,365,82384
gtaagctatgtcatactactgtcga..........tttgcaaattggagaaaaatttcag
8XM_046742242.1-E836,365,82436,365,92601103
ATAGGCACTTTGGCTGGTAACTTGATGATAAAACATCAGCACCATGAATTCCCATCCGAT
ATTTTTCTGATCCTCGAAACCGTTGGTGTTCAACTCCACATCC                 
 Intron 8-936,365,92736,366,02094
gtaagaattttgacaattttgtgac..........ttggataacaattgataattttcag
9XM_046742242.1-E936,366,02136,366,14810128
TTGAAAATCCTACAGACAAGCTGAGTGTGAATCTTATACAGTTTCTTGAAATGGATATGA
GACATAAACTTATATACAGCATTATTTTACCGCCCCTCGAAAGCGAGTACGAATTCAGAT
CCTTCAAG                                                    
 Intron 9-1036,366,14936,366,295147
gtatactaattgtaaatctatttac..........tcaaattctttttaacttggaacag
10XM_046742242.1-E1036,366,29636,366,41800123
ATAATGCCTAGAGCGCAGAACGCGCATGCGCACGTTAACGCTGGATTTCTTTTCAAACTT
GACGAAGGTGGGAAGGTTTTAGAAATGCCAAACATTATCATCGGTGGAATCAGAAATGAT
TTT                                                         
 Intron 10-1136,366,41936,366,47759
gtgagtatcttcggtgcatccaaac..........actgaaatgttgtaaataattacag
11XM_046742242.1-E1136,366,47836,366,64500168
CTTCACGCGCGCAAAACAGAAGAATATTTGAAGGGTAAAAACTTGTTGACCAACGATGTC
TTCCAGAGGGCGATCCAAGTTTTGCACAACGAACTCAACCCAGATCACATACTTCCCGAT
TATTCTTCCGAATTTCGGAAAATATTGGCTGAAGGTTTATTCTACAAA            
 Intron 11-1236,366,64636,366,71570
gtaagttgtactggaacaattatgt..........acgtattaaacaatcgtgatgacag
12XM_046742242.1-E1236,366,71636,367,01800303
ATAATCGTTCCCGGGTTTCAGTATGTTTTAAGCATAAACCCGAACAATATTGACCCAAGA
CTGCGAAGCGGGGGAATGATTTTAGAACGAGGGTTATCAACGGGCAAGCAGGATTTTGAT
ACGGATAGAAATATATGGCCCCTGAATAAGCCACTGCCGAAACTTGAGGCCATATACCAA
ACATCAGGCGAGGCTCACTATATTAACGACATCAAGACAATGCCAGACGAAGTACATTGT
GCCTTTGTACTGACTGACGTTGCGAATGGGTACATCGAGCACGTCGACACAACGGAGGTT
ATG                                                         
 Intron 12-1336,367,01936,367,138120
gtaggaatgatattattgtgtttcg..........gtaatctgcatatacgtaatttcag
13XM_046742242.1-E1336,367,13936,367,24300105
AAAATGAAAGGTGTTATTGCCTTTTATGACGTATCGGATGTGCCGGGAAAAAACGTATTC
ATACCAAAAGAAGCAGAGATATTTTATCTGCCCTTCAATGAACCC               
 Intron 13-1436,367,24436,367,769526
gtaagctgccatatatatatttgta..........tccactttctttgaacgtactccag
14XM_046742242.1-E1436,367,77036,367,98301214
TTGTTTGCGGATAAGGAAGTTCTGTACGCCGGTCAACCGCTTGGGATGATAGTTGCATCG
AGTAACGCAATTGCTAACGAAGCCGTGAACAAAGTAAAAGTAATTTATACCGGGTCATTT
GAAAAAAAGGCAATCATCTCCATCGAAGATGCAATTGCCTCGAAAGATGACAGCCGAATA
TCTACTCCGGTCGTTATACCAGCTGAAAGTAGAG                          
 Intron 14-1536,367,98436,368,625642
gtatagtactggggaaatcccatct..........cgcttgtgttaattatggtgtgcag
15XM_046742242.1-E1536,368,62636,368,80912184
GAACTGACACTAAATACGTGATCAAGGGGGATTTCGTCTGCGGCGGACAATATCACTATA
CAATGGAGACTCAGACTTGTGTCTGTTTGCCCGTCGAAGATGGTATAGACGTATACACGT
CGACACAAAATATTGACCTCAATCAAATTGCTATTGCGACATGCCTGGGTGTACCGCAAA
ACAG                                                        
 Intron 15-1636,368,81036,369,8691,060
gtgagctggtgcatgcaagatttcg..........aaaatgtaacaatccttacccctag
16XM_046742242.1-E1636,369,87036,370,24921380
CATCAACATACGCGTAAAGCGATTAGGCGGTGGCTACGGGGCTAAGATATCGCGTGCAGC
CCAGGTAGCCTGCGCATGTGCCCTGGCTTGCCACAAATTGAACCGACCGGCCAGATTCGT
GATGACACTCGAGAGTAACATGAGCTCGATTGGGAAACGATCTCCGTCGTATCACGAGTA
CGAGGTCGGCGTTGACATTAACGGGAAGATACAGTATCTAAACGTAAAACACTGGTCCAA
TTCCGGTGCAATTTTCAACGAATCTTCAAGTCCCGTAATAGCTTATCACTGTGGTAACTG
TTACGACACAAGTACATGGACCCGCGAGGCATATGAGGTCAGAACCGACCTACCTACAAA
CACCTACTGCCGAGCGCCGG                                        
 Intron 16-1736,370,25036,370,34091
gtgcgtagaatataattataatttg..........taacatactgcatcgtattctgtag
17XM_046742242.1-E1736,370,34136,370,53410194
CCTCCACGGAGGGTATAGCCCTGGCTGAGAATGTAATGGAACATGTTGCTAGGGAGCTTG
GTAAAGACCCCATGGATATTCGAAGTGTAAACATGAACCCGGCCGACAATTGCATTATGA
ACGAACTTATCGAGGACTTGAAAGTAACTGCCGACTATAACATGAGAAGGAAGGCCGTGG
AGAGTTTCAATCGT                                              
 Intron 17-1836,370,53536,370,62995
gtacgtgtagaaacgaaagtttatc..........atgcagagcgattttctcttcgcag
18XM_046742242.1-E1836,370,63036,370,78800159
GAGAATCGATGGAAGAAAAAAGGTATTGCTATGGTACCTATGAAGTACCCGTTCACATTC
TACGGACAATTTAATGTCCTGGTGTCTGTTTATGCTCGTGATGGAACAGTAGCAATTACT
CACGGGGGTATCGAATGTGGTCAAGGAATCAATACAAAG                     
 Intron 18-1936,370,78936,370,923135
gtacgcagataactgacagtgtgca..........cttcatttggtatcgtatgctttag
19XM_046742242.1-E1936,370,92436,371,05200129
GTTGCTCAAACGGCTGCCTATATTCTTGGCATTGATTTGGAGATGATTTCGATAAAGCCA
ACCACCAATCTGACATCACCTAATAATACTGTGACTGGAGGCAGCTGGACCAGCGATTCC
TGTGCATAC                                                   
 Intron 19-2036,371,05336,372,1701,118
gtcagtacttttgtcttgtcaacac..........ttaatgatctaatgttcattgacag
20XM_046742242.1-E2036,372,17136,372,30102131
GCTACGATGATGGCGTGCAAAGAGCTAATCAAGAGGTTGGAACCAATTAAAACAGAATTG
CAGGAACCAACGTGGAAAGATCTGGTGTTCGCGGCTCATCAGAAGGACGTTGATTTATGT
GCACGGTACAT                                                 
 Intron 20-2136,372,30236,372,451150
gtaagtaagacgctagacggttcga..........aactgagggtacttcaatgtaccag
21XM_046742242.1-E2136,372,45236,372,70720256
GTTCGCCGCAACGAAGGATGACGTGAAACCTTACGCTATCTGGGGATGCGCTGTAGGTGA
GGTAGAAGTGGATTTGCTTACTGGCCAGCACGTCGTAACCAGAGTTGACCTAATGGTTGA
CGCAGGCATCAGCATGAGTCCGGAGGTGGATATTGGACAAGCTGAAGGCGCTTTTATCAT
GGGTCTTGGATATTGGACCAGTGAGGATTTAATATACGACCCAGAGACAGGAGTTCTGAC
GAACAATAGAACTTGG                                            
 Intron 21-2236,372,70836,372,809102
gtataacttttcgttacatacatac..........aactaggcgtaacaatgctttgcag
22XM_046742242.1-E2236,372,81036,372,9060197
AATTATAAACCACCCGGAGCCAAGGATATACCTATTGATTTTCGCATCTCACTTCGCAGA
AATGCTCCGAATCCACTTGGAGTTCTGAGGGCTAAAG                       
 Intron 22-2336,372,90736,373,691785
gtatagtggtatttttgtcttattc..........acatccacaaattttggatccacag
23XM_046742242.1-E2336,373,69236,373,80211111
CTACCGGTGAGCCGTCATTGTGTACGAGCTGCGTAATTATGTTTGCGATTCGTAACGCCA
TAAACGCTGCCAGGGCTGATGCTGGAAATACTGAGAAGTGGTACGATCTAC         
 Intron 23-2436,373,80336,373,984182
gtaagtacctttatctataagtagg..........tatatacatattatgtttcgttcag
24XM_046742242.1-E2436,373,98536,374,3971-413
CTGCTCCGATAACAACCGAACGGATCCTGTTAAGCAGTTTGACCAACAAAGAGCAGATGG
TTATTTAACGTTTAAAATTTAAATTAAAGACGGAACAATGATTATACAACCTTAGGAAAC
AAAAGCATTCAGTACCGCACAGATTATCATTACCCACGGTTTCAGTATTTTATCCGAGGA
AGCTCAATCGTGAATCTATAAGCAATTAGCTATACTGTTAAATTTAGTATAACAGCATAA
ATCCACATATCATGCCTAGTATCTGTTTCATTATTATTTTCCCAAAGACAAAGTTAACAC
AGTAGAATTACATTATCTCATTGTTTTGTTTTTATGCGCAATAATGTAGACTACCAAGTA
GATATAAACTGTACAAGTAATGTATAAAAATATACTCAACTTACTTATTTATA       
3' downstream sequence
ctttgtaaaaattatcactcactaacgtttttcaactgggaccgcgtatt..........