Penaeus monodon (Black tiger shrimp, SGIC_2016) Assembly and Gene Annotation
About Penaeus monodon
Penaeus monodon, commonly known as the giant tiger prawn, Asian tiger shrimp, black tiger shrimp (Penaeus monodon), and other names, is a marine crustacean that is widely reared for food.
Picture credit: Creative Commons Attribution 3.0 via Wikimedia Commons (Image source)
Taxonomy ID 6687
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_015228065.1].
The total length of the assembly is 2394347767 bp contained within 26876 scaffolds. The scaffold N50 value is 44862054, the scaffold L50 value is 23. Assembly gaps span 393564173 bp. The GC% content of the assembly is 0.0%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | NSTDA_Pmon_1, INSDC Assembly GCA_015228065.1, |
Database version | 113.1 |
Golden Path Length | 2,394,347,767 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | SAFE-Aqua |
Gene counts
Coding genes | 24,092 |
Non coding genes | 4,281 |
Small non coding genes | 2,497 |
Long non coding genes | 1,784 |
Pseudogenes | 3,169 |
Gene transcripts | 40,963 |