Penaeus vannamei (Pacific white shrimp) Assembly and Gene Annotation
About Penaeus vannamei
Whiteleg shrimp, also known as Pacific white shrimp (Penaeus vannamei) or King prawn, is a species of prawn of the eastern Pacific Ocean commonly caught or farmed for food.
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Taxonomy ID 6689
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_003789085.1].
The total length of the assembly is 1663581301 bp contained within 4683 scaffolds. The scaffold N50 value is 605555, the scaffold L50 value is 892. Assembly gaps span 45527693 bp. The GC% content of the assembly is 36.5%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | ASM378908v1, INSDC Assembly GCA_003789085.1, |
Database version | 113.1 |
Golden Path Length | 1,663,581,301 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Institute of Oceanology, Chinese Academy of Sciences |
Gene counts
Coding genes | 24,987 |
Non coding genes | 4,374 |
Small non coding genes | 2,583 |
Long non coding genes | 1,791 |
Pseudogenes | 1,409 |
Gene transcripts | 39,654 |