Pocillopora damicornis (Cauliflower coral, RSMAS) Assembly and Gene Annotation
About Pocillopora damicornis
Pocillopora damicornis, commonly known as the cauliflower coral or lace coral, is a species of stony coral in the family Pocilloporidae. It is native to tropical and subtropical parts of the Indian and Pacific Oceans.
Picture credit: Creative Commons Attribution-Share Alike 4.0 via Wikimedia Commons (Image source)
Taxonomy ID 46731
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_003704095.1].
The total length of the assembly is 234350878 bp contained within 4393 scaffolds. The scaffold N50 value is 326133, the scaffold L50 value is 198. Assembly gaps span 8606772 bp. The GC% content of the assembly is 38.0%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | ASM370409v1, INSDC Assembly GCA_003704095.1, |
Database version | 113.1 |
Golden Path Length | 234,350,878 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | University of Miami |
Gene counts
Coding genes | 19,935 |
Non coding genes | 1,906 |
Small non coding genes | 382 |
Long non coding genes | 1,524 |
Pseudogenes | 1,237 |
Gene transcripts | 28,861 |