Schistocerca serialis cubense (Grasshoppers, TAMUIC-IGC-003099) Assembly and Gene Annotation
About Schistocerca serialis cubense
Schistocerca [1] is a genus of grasshoppers, commonly called bird grasshoppers, many of which swarm as locusts. The best known species is probably the desert locust (S. gregaria) and trans-Atlantic flight may explain the biogeography of some locust species.[2]. S. serialis was first described in 1815 [3].
Picture credit: Bob Peterson from North Palm Beach, Florida, Planet Earth CC BY-SA 2.0 via Wikimedia Commons (Image source)
Taxonomy ID 2023355
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_023864345.2].
The total length of the assembly is 9082822131 bp contained within 1455 scaffolds. The scaffold N50 value is 849285246, the scaffold L50 value is 5. Assembly gaps span 255132 bp. The GC% content of the assembly is 42.5%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_023864345.2.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
* References *
- Stål C (1873) Recensio Orthopterorum. Revue critique des Orthoptères décrits par Linné, De Geer et Thunberg 1: 64.
- Lovejoy, N. R.; et al. (2006). "Ancient trans-Atlantic flight explains locust biogeography: molecular phylogenetics of Schistocerca". Proc Biol Sci. 273 (1588): 767–774. doi:10.1098/rspb.2005.3381. PMC 1560218. PMID 16618668.
- Thunberg, C.P. (1815) Hemipterorum maxillosorum genera illustrata plurimisque novis speciebus ditata ac descripta. Mémoires de l'Académie Impériale des Sciences de St. Pétersbourg 5, 211–301.
Statistics
Summary
Assembly | iqSchSeri2.2, INSDC Assembly GCA_023864345.3, |
Database version | 113.1 |
Golden Path Length | 9,082,822,131 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Behavioral Plasticity Research Institute (BPRI) |
Gene counts
Coding genes | 17,237 |
Non coding genes | 51,179 |
Small non coding genes | 49,759 |
Long non coding genes | 1,420 |
Pseudogenes | 7,394 |
Gene transcripts | 87,409 |