Zeugodacus cucurbitae (Melon fly, PBARC_wt_2022May) Assembly and Gene Annotation
About Zeugodacus cucurbitae
Bactrocera cucurbitae, the melon fly (Zeugodacus cucurbitae), is a fruit fly of the family Tephritidae. It is a serious agricultural pest, particularly in Hawaii.
Picture credit: Creative Commons Attribution 3.0 via Wikimedia Commons (Image source) Taxonomy ID 28588
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_028554725.1].
The total length of the assembly is 439243742 bp contained within 55 scaffolds. The scaffold N50 value is 75513634, the scaffold L50 value is 3. The GC% content of the assembly is 35.5%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_028554725.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release vGCF_028554725.1-RS_2023_03. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | idZeuCucr1.2, INSDC Assembly GCA_028554725.2, |
Database version | 113.1 |
Golden Path Length | 439,259,567 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | United States Department of Agriculture |
Gene counts
Coding genes | 13,888 |
Non coding genes | 2,672 |
Small non coding genes | 1,265 |
Long non coding genes | 1,400 |
Misc non coding genes | 7 |
Pseudogenes | 1,165 |
Gene transcripts | 32,255 |