Transcript: F42C5.3a.1

Description

Uncharacterized protein [Source:NCBI gene;Acc:185663]

Location

About this transcript

This transcript has 6 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F42C5.3a.1	1000	288aa	F42C5.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q20322	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	F42C5.3b.1	838	250aa	F42C5.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLW1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,000 bps, Translation length: 288 residues

Version

F42C5.3a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase