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DB built by FlyBase

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Gene: Iml1 FBgn0035227

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Description

Increased minichromosome loss 1

Gene Synonyms

Location

Primary_assembly 3L: 1,523,414-1,534,034 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 5 transcripts (splice variants) and 95 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Iml1-RA	FBtr0072703	4861	1544aa	FBpp0072587	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0E3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Iml1-RD	FBtr0333401	4762	1511aa	FBpp0305593	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PE64	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Iml1-RE	FBtr0333402	4738	1503aa	FBpp0305594	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDV3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Iml1-RC	FBtr0072705	4645	1472aa	FBpp0072589	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRG8	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Iml1-RB	FBtr0072704	4642	1471aa	FBpp0072588	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRG9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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