Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: a FBgn0000008

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Description

arc

Location

Primary_assembly 2R: 22,136,968-22,172,834 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 80 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
a-RB	FBtr0071764	5173	1329aa	FBpp0071678	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W283	NM_001014543.2 NM_079902 NM_079902.3 NM_166514.2 NP_001014543.1 NP_524641 NP_524641.1 NP_726168.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
a-RA	FBtr0071763	4847	1329aa	FBpp0071677	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W283	NM_001014543.2 NM_079902.3 NM_166514 NM_166514.2 NP_001014543.1 NP_524641.1 NP_726168 NP_726168.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
a-RC	FBtr0100521	4665	1329aa	FBpp0099961	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W283	NM_001014543 NM_001014543.2 NM_079902.3 NM_166514.2 NP_001014543 NP_001014543.1 NP_524641.1 NP_726168.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
a-RD	FBtr0342981	3897	1087aa	FBpp0309745	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LG21	NM_001299777 NM_001299777.1 NP_001286706 NP_001286706.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays