Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: SF1 FBgn0025571

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Description

Splicing factor 1

Location

Primary_assembly 3R: 17,540,421-17,545,148 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 106 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SF1-RA	FBtr0083456	2784	787aa	FBpp0082897	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXI7 Q95S23 Q9U1J9 Q9VEJ1	NM_079915 NM_079915.3 NP_524654 NP_524654.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
SF1-RC	FBtr0331707	2708	323aa	FBpp0304096	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGU8	NM_001275744 NM_001275744.1 NP_001262673 NP_001262673.1
SF1-RB	FBtr0331706	1533	347aa	FBpp0304095	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KG60 H1UUB8	NM_001275743 NM_001275743.2 NP_001262672 NP_001262672.1

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Summary

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Gene-based displays