Summary
- Splice variants
- Transcript comparison
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Sequence
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Metazoan Compara
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- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG8708 FBgn0033271

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Location

Primary_assembly 2R: 8,159,406-8,161,565 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 52 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG8708-RD	FBtr0307067	1862	450aa	FBpp0297910	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JRF9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG8708-RB	FBtr0088809	1674	450aa	FBpp0087885	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JRF9 Q7K509	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG8708-RC	FBtr0307066	1626	444aa	FBpp0297909	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K711 H1UUF8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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