Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Chd1 FBgn0250786

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Description

Chromodomain-helicase-DNA-binding protein 1

Location

Primary_assembly 2L: 2,979,562-2,987,723 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 75 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Chd1-RC	FBtr0331654	6463	1881aa	FBpp0304044	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PEB2 Q8SWV9	NM_001273046 NM_001273046.1 NP_001259975 NP_001259975.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Chd1-RA	FBtr0077674	6332	1883aa	FBpp0077358	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1PFS9 B1PFT0 B1PFT1 B1PFT7 B1PFT9 B1PFU1 B1PFV0 B1PFV8 B1PFZ0 B1PFZ1 B1PFZ4 B1PG01 B1PG07 B1PG10 B1PG15 C0HBU2 Q6NP59 Q7KU24 R9TG69	NM_057849 NM_057849.5 NP_477197 NP_477197.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Chd1-RB	FBtr0305980	6216	1900aa	FBpp0297122	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9ND16	NM_001258922 NM_001258922.1 NP_001245851 NP_001245851.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5

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Summary

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Gene-based displays