Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: XM_625226

Description

catenin alpha, transcript variant X1

Location

About this transcript

This transcript has 7 exons and is annotated with 30 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	XM_006563384	3108	919aa	XP_006563447	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_006563385	2990	918aa	XP_006563448	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AF89	-	-
-	XM_006563386	2969	910aa	XP_006563449	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_625226	2961	909aa	XP_625229	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,961 bps, Translation length: 909 residues

Version

XM_625226

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.