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Culex quinquefasciatus (CpipJ2) ▼

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The Culex quinquefasciatus data and its display on Ensembl Genomes are made possible through a joint effort by the Ensembl Genomes group and VectorBase, a component of VEuPathDB.

About Culex quinquefasciatus

Culex quinquefasciatus, the Southern House Mosquito, is the vector responsible for transmission of filariasis and a number of viruses including West Nile virus, St. Louis encephalitis and Japanese encephalitis.

Picture credit (public domain): James Gathany (CDC) 2001

Taxonomy ID 7176

Data source VectorBase

More information and statistics

Example region

Genome assembly: CpipJ2

More information and statistics

Download DNA sequence (FASTA)

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Example geneExample transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Example gene tree

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Genomic alignments [2] [Show»«Hide
Culex quinquefasciatus : Aedes aegypti (LVP_AGWG)LASTZ_NET | stats
Culex quinquefasciatus : Anopheles gambiaeLASTZ_NET | stats
]

Example variant

Variation

What can I find? Short sequence variants.

More about variation in Ensembl Metazoa

Download all variants - GVF - VCF - VEP

Variant Effect Predictor

About this species