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Culex quinquefasciatus (CpipJ2) ▼

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VectorBase The Culex quinquefasciatus data and its display on Ensembl Genomes are made possible through a joint effort by the Ensembl Genomes group and VectorBase, a NIAID Bioinformatics Resource Center. The source data for this genome and other resources can be accessed via the VectorBase browser.

About Culex quinquefasciatus

Culex quinquefasciatus, the Southern House Mosquito, is the vector responsible for transmission of filariasis and a number of viruses including West Nile virus, St. Louis encephalitis and Japanese encephalitis.

Picture credit (public domain): James Gathany (CDC) 2001

Taxonomy ID 7176

Data source VectorBase

More information and statistics

Example region

Genome assembly: CpipJ2

More information and statistics

Download DNA sequence (FASTA)

Display your data in Ensembl Metazoa

Example geneExample transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Example gene tree

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Genomic alignments [3] [Show»«Hide
Culex : Aedes aegyptiTRANSLATED_BLAT_NET | stats
Culex : Anopheles gambiaeTRANSLATED_BLAT_NET | stats
Culex : Drosophila melanogasterLASTZ_NET | stats
]

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

EST Alignments

Culex quinquefasciatus ESTs were mapped onto the genome using Exonerate (Example: supercont3.1:434000-584000).

About this species