▼

Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by WormBase

.

Gene: apx-1 WBGene00000168

.

Description

Anterior pharynx in excess protein 1; Delta-like protein; EGF-like domain-containing protein [Source:NCBI gene;Acc:178759]

Location

Chromosome V: 3,210,196-3,223,221 forward strand.

WBcel235:BX284605.5

About this gene

This gene has 6 transcripts (splice variants), 117 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	K08D9.3a.1	2346	515aa	K08D9.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P41990	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	K08D9.3f.1	2347	513aa	K08D9.3f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A486WTV8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	K08D9.3e.1	642	213aa	K08D9.3e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S4XRY4	-	-
-	K08D9.3b	1683	No protein	-	A non-coding gene.ncRNA	-	-	-
-	K08D9.3c	1272	No protein	-	A non-coding gene.ncRNA	-	-	-
-	K08D9.3d	1026	No protein	-	A non-coding gene.ncRNA	-	-	-

.

Summary

.

.