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DB built by WormBase

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Gene: rig-1 WBGene00004369

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Description

neuRonal IGCAM [Source:NCBI gene;Acc:181115]

Location

Chromosome X: 8,660,619-8,671,827 forward strand.

WBcel235:BX284606.5

About this gene

This gene has 8 transcripts (splice variants), 1639 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	K09E2.4a.1	3784	1083aa	K09E2.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KZQ5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	K09E2.4a.2	3737	1083aa	K09E2.4a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KZQ5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	K09E2.4b.2	3651	300aa	K09E2.4b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7Z2A2	-	-
-	K09E2.4b.6	2937	300aa	K09E2.4b.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7Z2A2	-	-
-	K09E2.4b.3	2522	300aa	K09E2.4b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7Z2A2	-	-
-	K09E2.4b.5	1491	300aa	K09E2.4b.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7Z2A2	-	-
-	K09E2.4b.4	1447	300aa	K09E2.4b.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7Z2A2	-	-
-	K09E2.4b.1	1307	300aa	K09E2.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7Z2A2	-	-

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Summary

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