Summary
- Splice variants
- Transcript comparison
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- GO: Cellular component
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DB built by WormBase

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Gene: K10C3.4 WBGene00010731

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Description

Transmembrane protein 98 [Source:NCBI gene;Acc:187255]

Location

Chromosome I: 9,853,654-9,863,495 forward strand.

WBcel235:BX284601.5

About this gene

This gene has 7 transcripts (splice variants) and 55 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	K10C3.4a.1	2466	370aa	K10C3.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O45665	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	K10C3.4a.2	2460	370aa	K10C3.4a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O45665	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	K10C3.4a.3	2403	370aa	K10C3.4a.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O45665	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	K10C3.4a.4	2394	370aa	K10C3.4a.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O45665	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	K10C3.4a.5	2321	370aa	K10C3.4a.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O45665	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	K10C3.4b.1	156	51aa	K10C3.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9P8A0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	K10C3.4c	1222	No protein	-	A non-coding gene.ncRNA	-	-	-

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Summary

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