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DB built by WormBase

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Gene: vha-5 WBGene00006914

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Description

V-type proton ATPase subunit a [Source:NCBI gene;Acc:177626]

Location

Chromosome IV: 8,303,968-8,307,371 forward strand.

WBcel235:BX284604.4

About this gene

This gene has 3 transcripts (splice variants), 75 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F35H10.4.1	2965	873aa	F35H10.4.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EEK9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	F35H10.4.3	2963	873aa	F35H10.4.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EEK9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	F35H10.4.2	2742	873aa	F35H10.4.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EEK9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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