▼

Loading…

Favourite species

All species

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by WormBase

.

Gene: pbrm-1 WBGene00007042

.

Description

HMG box domain-containing protein [Source:NCBI gene;Acc:172504]

Location

Chromosome I: 7,495,436-7,503,582 forward strand.

WBcel235:BX284601.5

About this gene

This gene has 4 transcripts (splice variants) and 88 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C26C6.1a.1	6001	1883aa	C26C6.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EEY5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	C26C6.1b.2	5979	513aa	C26C6.1b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q565A2	-	-
-	C26C6.1b.3	2603	513aa	C26C6.1b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q565A2	-	-
-	C26C6.1b.1	1954	513aa	C26C6.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q565A2	-	-

.

Summary

.

.