Transcript: W07G1.5b.1

Description

Protein rpi-1 [Source:NCBI gene;Acc:189281]

Location

About this transcript

This transcript has 5 exons and is annotated with 18 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	W07G1.5b.1	1508	450aa	W07G1.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q69Z08	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	W07G1.5a.1	1467	438aa	W07G1.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q69Z08	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,508 bps, Translation length: 450 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q69Z08

Version

W07G1.5b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase