Drosophila grimshawi

Drosophila grimshawi

Data Source FlyBase | Taxonomy ID 7222

About Drosophila grimshawi

Drosophila grimshawi is a Hawaiian fruitfly, and was one of 12 fruitfly genomes sequenced for a large comparative study [1]. Ensembl Genomes imports data from FlyBase, who also have more information about the biology of Drosophila grimshawi, and a phylogeny of the 12 sequenced fruitfly species.

Picture credit (Creative Commons BY-NC-SA 2.0 FR): Nicolas Gompel 2008. Image shows a female fly.

More information and statistics

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Download alignments (EMF)

Genomic alignments [1] [Show»«Hide
Drosophila grimshawi : Drosophila melanogasterTRANSLATED_BLAT_NET | stats
]

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

EST, Gene, and Protein Alignments

Drosophila grimshawi ESTs from dbEST were mapped onto the genome using Exonerate.

UniGene sequences were positioned on the genome using WU-BlastN with Genscan predictions. WU-BlastP was used to map UniProtKB proteins onto Genscan-predicted peptides.