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DB built by FlyBase

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Gene: dre4 FBgn0002183

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Description

dre4

Gene Synonyms

Location

Primary_assembly 3L: 1,871,574-1,876,312 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 2 transcripts (splice variants) and 77 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
dre4-RA	FBtr0072864	3690	1122aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
dre4-RB	FBtr0072865	3573	1083aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1WWE1 Q8IRG6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Supporting evidence

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Transcript
CDS support
UTR support
Exon supporting features

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Transcript	CDS support	UTR support	Exon supporting features
FBtr0072864
FBtr0072865

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