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DB built by FlyBase

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Gene: Snx27 FBgn0052758

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Description

Sorting nexin 27

Gene Synonyms

Location

Primary_assembly X: 5,719,374-5,738,031 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 72 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
Snx27-RA	FBtr0070843	2904	531aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W486	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Snx27-RD	FBtr0340670	3596	430aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JIH1	-	-
Snx27-RC	FBtr0339525	3273	443aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F3YD98	-	-

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Pan-taxonomic Compara

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Genomic alignments (Not available)

Gene tree

Orthologues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data