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DB built by FlyBase

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Gene: Pkc98E FBgn0003093

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Description

Protein C kinase 98E

Gene Synonyms

Location

Primary_assembly 3R: 29,039,156-29,049,148 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 62 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pkc98E-RA	FBtr0085359	5529	739aa	FBpp0084728	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P13678	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Pkc98E-RD	FBtr0339150	3449	739aa	FBpp0308295	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P13678	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Pkc98E-RC	FBtr0339149	3412	738aa	FBpp0308294	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LI13	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Pkc98E-RB	FBtr0301516	3383	554aa	FBpp0290731	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4QQA3 Q95T78	-	-

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Summary

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