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DB built by FlyBase

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Gene: skd FBgn0003415

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Description

skuld

Gene Synonyms

Location

Primary_assembly 3L: 20,992,814-21,027,434 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants) and 77 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
skd-RE	FBtr0112830	10703	2768aa	FBpp0111743	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JNW4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
skd-RC	FBtr0078329	11414	2618aa	FBpp0077985	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E6PBY1 Q7KTX8	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
skd-RD	FBtr0078328	10465	2618aa	FBpp0077984	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E6PBY1 Q7KTX8	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
skd-RF	FBtr0333284	9982	2601aa	FBpp0305479	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD50	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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