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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: ph-d FBgn0004860

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Description

polyhomeotic distal

Gene Synonyms

Location

Primary_assembly X: 2,115,727-2,123,286 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 2 transcripts (splice variants), 67 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ph-d-RA	FBtr0070433	5821	1537aa	FBpp0070417	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1VJ97 B1VJD2 B1VJD3 B1VJD5 B1VJD9 C8VV28 Q9W523	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ph-d-RB	FBtr0112843	6020	1359aa	FBpp0111756	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1VJA9 Q9NF31	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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