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DB built by FlyBase

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Gene: Nurf-38 FBgn0016687

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Description

Nucleosome remodeling factor - 38kD

Gene Synonyms

Location

Primary_assembly 2R: 24,558,967-24,561,087 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants) and 88 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Nurf-38-RA	FBtr0072343	1178	338aa	FBpp0072250	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B9EQY3 I0DHK6 O77460	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Nurf-38-RC	FBtr0305985	1281	290aa	FBpp0297127	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7G9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Nurf-38-RB	FBtr0273253	1144	290aa	FBpp0271761	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZQ7	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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