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Gene: Smg5 FBgn0019890

Description

Smg5 nonsense mediated mRNA decay factor

Gene Synonyms

Location

Primary_assembly 2L: 13,898,828-13,904,661 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 72 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Smg5-RB	FBtr0080562	4809	1177aa	FBpp0080139	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V414	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Smg5-RC	FBtr0343669	4102	1177aa	FBpp0310261	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V414	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Smg5-RA	FBtr0080561	4021	1177aa	FBpp0080138	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T080 Q95TL1 Q9V414	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Gene: Smg5 FBgn0019890

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