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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
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- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- GO: Cellular component
- GO: Molecular function
- GO: Biological process
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Genetic Variation
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DB built by FlyBase

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Gene: CG5885 FBgn0025700

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Location

Primary_assembly 2L: 9,917,221-9,918,330 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 2 transcripts (splice variants) and 77 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5885-RB	FBtr0445309	1044	190aa	FBpp0401486	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VL69	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5885-RA	FBtr0079900	890	190aa	FBpp0079495	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VL69	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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