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Summary
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DB built by FlyBase

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Gene: ValRS FBgn0027079

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Description

Valyl-tRNA synthetase

Gene Synonyms

Location

Primary_assembly 2R: 13,198,850-13,202,709 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 55 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ValRS-RC	FBtr0333148	3391	1055aa	FBpp0305353	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KF06	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ValRS-RB	FBtr0087734	3360	1049aa	FBpp0086847	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E993 Q960E6 T2GFI6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ValRS-RA	FBtr0087735	3324	1049aa	FBpp0086848	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E993	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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