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Summary
- Splice variants
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DB built by FlyBase

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Gene: CG10254 FBgn0027512

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Location

Primary_assembly 3R: 23,689,007-23,694,983 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 44 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG10254-RA	FBtr0084477	4997	1398aa	FBpp0083868	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XZ32	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG10254-RC	FBtr0334770	4940	1379aa	FBpp0306810	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHY8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG10254-RB	FBtr0084476	4827	1398aa	FBpp0083867	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XZ32	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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