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DB built by FlyBase

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Gene: msps FBgn0027948

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Description

mini spindles

Gene Synonyms

Location

Primary_assembly 3R: 16,050,801-16,060,675 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 5 transcripts (splice variants) and 82 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
msps-RD	FBtr0304801	7551	2082aa	FBpp0293341	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K700	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
msps-RE	FBtr0304802	7527	2074aa	FBpp0293342	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K664 D3DMH7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
msps-RB	FBtr0301479	7455	2050aa	FBpp0290694	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIM4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
msps-RC	FBtr0301480	7431	2042aa	FBpp0290695	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VEZ3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
msps-RF	FBtr0304803	7118	2050aa	FBpp0293343	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIM4 Q95TZ9 Q9U5W6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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