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DB built by FlyBase

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Gene: Vha100-1 FBgn0028671

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Description

Vacuolar H[+] ATPase 100kD subunit 1

Gene Synonyms

Location

Primary_assembly 3R: 29,131,193-29,137,980 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 10 transcripts (splice variants), 82 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Vha100-1-RE	FBtr0085381	3066	855aa	FBpp0084750	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XZ10	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Vha100-1-RI	FBtr0301650	3052	852aa	FBpp0290864	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NLA3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Vha100-1-RD	FBtr0085380	3009	836aa	FBpp0084749	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IML3	-	-
Vha100-1-RA	FBtr0085379	3000	833aa	FBpp0084748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IML5	-	-
Vha100-1-RC	FBtr0085374	2959	855aa	FBpp0084743	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XZ10	-	-
Vha100-1-RJ	FBtr0301651	2950	852aa	FBpp0290865	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NLA3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Vha100-1-RG	FBtr0085377	2944	850aa	FBpp0084746	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IML4	-	-
Vha100-1-RB	FBtr0085375	2907	836aa	FBpp0084744	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IML3	-	-
Vha100-1-RK	FBtr0335405	2902	836aa	FBpp0307388	Gene/transcipt that contains an open reading frame (ORF).Protein coding	N0A2P0 Q8IML3	-	-
Vha100-1-RF	FBtr0085376	2898	833aa	FBpp0084745	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86M57 Q86P41 Q8IML5	-	-

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Summary

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