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DB built by FlyBase

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Gene: NFAT FBgn0030505

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Description

NFAT nuclear factor

Gene Synonyms

Location

Primary_assembly X: 13,624,745-13,664,568 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 7 transcripts (splice variants) and 67 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
NFAT-RB	FBtr0112980	5651	1457aa	FBpp0111893	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JUV3 F6J6I1 F6J6I4 F6J6I7 F6J6I9 F6J6J8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
NFAT-RE	FBtr0301451	6009	600aa	FBpp0290666	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJP6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
NFAT-RC	FBtr0301449	5935	1248aa	FBpp0290664	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJP5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
NFAT-RA	FBtr0073808	5870	1419aa	FBpp0073639	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J6J0 F6J6J4 F6J6J5 F6J6J6 Q9VYA6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
NFAT-RG	FBtr0340396	5781	562aa	FBpp0309342	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PH25	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
NFAT-RD	FBtr0301450	5243	1210aa	FBpp0290665	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86NT0 Q9GU53	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
NFAT-RH	FBtr0345127	5049	1248aa	FBpp0311348	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEY8 E1JJP5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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