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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene tree (Drosophilidae)
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG3107 FBgn0033005

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Location

Primary_assembly 2R: 5,090,581-5,095,090 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 76 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG3107-RD	FBtr0345009	3966	1034aa	FBpp0311260	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LES3 Q9V9E3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3107-RB	FBtr0086078	3331	1034aa	FBpp0085414	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LES3 Q9V9E3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3107-RA	FBtr0086077	3230	1034aa	FBpp0085413	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LES3 Q9V9E3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3107-RC	FBtr0111280	3156	1034aa	FBpp0110537	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LES3 Q9V9E3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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