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Summary
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DB built by FlyBase

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Gene: Targ FBgn0033955

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Description

Tarag

Gene Synonyms

Location

Primary_assembly 2R: 14,668,391-14,671,675 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 541 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Targ-RD	FBtr0339981	2815	859aa	FBpp0309002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LFF4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Targ-RE	FBtr0339982	2810	357aa	FBpp0309003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGH0	-	-
Targ-RC	FBtr0300765	2809	800aa	FBpp0289989	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JH66	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Targ-RB	FBtr0300764	2806	856aa	FBpp0289988	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V4X4 Q4V4Y5 Q4V507	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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