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DB built by FlyBase

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Gene: Srrm234 FBgn0035253

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Description

Serine-arginine repetitive matrix 2/3/4

Gene Synonyms

Location

Primary_assembly 3L: 1,654,247-1,665,064 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 10 transcripts (splice variants) and 14 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Srrm234-RF	FBtr0303107	5503	1655aa	FBpp0292226	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JNI2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Srrm234-RG	FBtr0309252	4204	1062aa	FBpp0301191	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZ99 Q960C4	-	-
Srrm234-RK	FBtr0481699	3894	1121aa	FBpp0428459	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
Srrm234-RL	FBtr0481700	3889	1117aa	FBpp0428460	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Srrm234-RC	FBtr0072807	3859	1107aa	FBpp0072689	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0B0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Srrm234-RJ	FBtr0481673	3821	263aa	FBpp0428451	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q960C4	-	-
Srrm234-RI	FBtr0481672	3682	1072aa	FBpp0428450	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TP3	-	-
Srrm234-RA	FBtr0072806	3652	1062aa	FBpp0072688	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZ99	-	-
Srrm234-RB	FBtr0072808	1187	158aa	FBpp0072690	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BP9	-	-
Srrm234-RH	FBtr0344837	936	174aa	FBpp0311152	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J8K5	-	-

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Summary

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