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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG1271 FBgn0035392

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Location

Primary_assembly 3L: 3,052,514-3,054,906 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 79 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG1271-RA	FBtr0072987	1776	556aa	FBpp0072857	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZV9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG1271-RC	FBtr0072989	2057	384aa	FBpp0072859	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KV84 Q8IGI3	-	-
CG1271-RB	FBtr0072986	1998	406aa	FBpp0072856	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I939	-	-
CG1271-RD	FBtr0072988	1725	539aa	FBpp0072858	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YTX2 Q8I940	-	-

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Summary

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