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DB built by FlyBase

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Gene: MED1 FBgn0037109

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Description

Mediator complex subunit 1

Gene Synonyms

Location

Primary_assembly 3L: 21,628,325-21,634,446 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 69 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
MED1-RA	FBtr0078464	4962	1475aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1NZC8 Q9VP05	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
MED1-RC	FBtr0333972	4957	1141aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PII7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
MED1-RB	FBtr0302592	4185	1080aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV55 H8F4P0 Q6NP23	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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