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DB built by FlyBase

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Gene: aux FBgn0037218

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Description

auxilin

Gene Synonyms

Location

Primary_assembly 3R: 4,211,783-4,227,518 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 4 transcripts (splice variants) and 80 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
aux-RA	FBtr0078965	4410	1165aa	FBpp0078604	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMY8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
aux-RB	FBtr0078966	4312	1165aa	FBpp0078605	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T0A7 Q9VMY8	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
aux-RD	FBtr0336706	4288	1157aa	FBpp0307687	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KF57	-	-
aux-RC	FBtr0336705	4276	1153aa	FBpp0307686	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KG14	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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