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Summary
- Splice variants
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DB built by FlyBase

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Gene: CG10445 FBgn0037531

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Gene Synonyms

Location

Primary_assembly 3R: 7,916,599-7,920,299 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 90 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG10445-RD	FBtr0304704	3399	945aa	FBpp0293247	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHY2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG10445-RC	FBtr0300685	2985	945aa	FBpp0289909	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V509 Q9VHY2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG10445-RE	FBtr0339711	2982	944aa	FBpp0308768	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGT5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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