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Summary
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DB built by FlyBase

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Gene: tHMG2 FBgn0038979

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Description

testis-enriched HMG-box-containing protein 2

Gene Synonyms

Location

Primary_assembly 3R: 22,492,953-22,493,746 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 40 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
tHMG2-RB	FBtr0301483	550	134aa	FBpp0290698	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIT5 G2J5V9 Q8T957	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
tHMG2-RA	FBtr0084259	588	133aa	FBpp0083652	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCZ4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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