Summary
- Splice variants
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DB built by FlyBase

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Gene: Tusp FBgn0039530

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Description

Tusp

Gene Synonyms

Location

Primary_assembly 3R: 27,607,879-27,634,932 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 70 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Tusp-RF	FBtr0335245	5635	1433aa	FBpp0307232	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KI44	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Tusp-RE	FBtr0302590	5998	1432aa	FBpp0291746	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VB18	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Tusp-RG	FBtr0335246	5626	1430aa	FBpp0307233	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHZ3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Tusp-RD	FBtr0302589	5398	1432aa	FBpp0291745	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9QPJ2 Q9VB18	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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