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DB built by FlyBase

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Gene: Tep4 FBgn0041180

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Description

Thioester-containing protein 4

Gene Synonyms

Location

Primary_assembly 2L: 19,548,507-19,556,451 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 176 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Tep4-RC	FBtr0331329	4700	1498aa	FBpp0303747	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0IQA2 M9PDR0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Tep4-RD	FBtr0331330	4723	1478aa	FBpp0303748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0ZWP5 M9PDF6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Tep4-RB	FBtr0331328	4717	1476aa	FBpp0303746	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0ZWM2 A0ZWM4 A0ZWN0 A0ZWN8 A0ZWP0 M9PD73	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Tep4-RA	FBtr0081254	4694	1496aa	FBpp0080795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0ZWP3 Q9NFV5 Q9VIT9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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