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DB built by FlyBase

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Gene: Mrtf FBgn0052296

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Description

Myocardin-related transcription factor

Gene Synonyms

Location

Primary_assembly 3L: 2,717,615-2,766,536 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 76 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Mrtf-RH	FBtr0344569	6224	1788aa	FBpp0310920	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z043	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mrtf-RD	FBtr0306331	7755	1495aa	FBpp0297427	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZY2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mrtf-RG	FBtr0333444	5661	1495aa	FBpp0305635	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3PFD7 D3PFE1 Q6B4I4 Q8MZ79 Q9VZY2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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