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DB built by FlyBase

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Gene: TfAP-2 FBgn0261953

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Description

Transcription factor AP-2

Gene Synonyms

Location

Primary_assembly 3L: 21,586,828-21,613,349 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 6 transcripts (splice variants) and 90 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
TfAP-2-RD	FBtr0333466	2237	471aa	FBpp0305656	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PIH9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
TfAP-2-RB	FBtr0078418	2219	465aa	FBpp0078072	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O96378	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
TfAP-2-RE	FBtr0333467	2012	467aa	FBpp0305657	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD85	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
TfAP-2-RA	FBtr0078419	1994	461aa	FBpp0078073	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O76923	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
TfAP-2-RF	FBtr0333468	1823	465aa	FBpp0305658	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFX8	-	-
TfAP-2-RC	FBtr0333465	1805	459aa	FBpp0305655	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PG57	-	-

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Summary

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