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DB built by FlyBase

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Gene: Lpin FBgn0263593

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Description

Lipin

Gene Synonyms

Location

Primary_assembly 2R: 8,136,986-8,156,654 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 11 transcripts (splice variants) and 76 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Lpin-RM	FBtr0303585	4369	1089aa	FBpp0292618	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXP0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Lpin-RK	FBtr0303583	4461	1035aa	FBpp0292616	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DY69	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Lpin-RD	FBtr0303574	4106	1088aa	FBpp0292607	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCQ5	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Lpin-RB	FBtr0113055	4088	1035aa	FBpp0111968	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DY69	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Lpin-RC	FBtr0303573	4085	1034aa	FBpp0292606	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD00	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Lpin-RA	FBtr0088815	3996	1089aa	FBpp0087891	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXP0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Lpin-RL	FBtr0303584	3959	992aa	FBpp0292617	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD31	-	-
Lpin-RE	FBtr0303575	3867	1045aa	FBpp0292608	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD27	-	-
Lpin-RH	FBtr0303578	3858	1043aa	FBpp0292611	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F0JAG5 I0E2I4	-	-
Lpin-RG	FBtr0303577	3351	1016aa	FBpp0292610	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCS1	-	-
Lpin-RJ	FBtr0303580	3187	962aa	FBpp0292613	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RVH5 E5DK16	-	-

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Summary

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