Summary
- Splice variants
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DB built by FlyBase

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Gene: CG44098 FBgn0264907

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Gene Synonyms

Location

Primary_assembly 3R: 4,750,409-4,773,197 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 104 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG44098-RE	FBtr0345143	4187	813aa	FBpp0311364	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D2NUL5 Q8SZ12	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44098-RC	FBtr0334965	3925	813aa	FBpp0306978	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D2NUL5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44098-RD	FBtr0334966	3830	775aa	FBpp0306979	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KF18 Q8SY27	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG44098-RB	FBtr0334964	3640	612aa	FBpp0306977	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VN52	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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