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Summary
- Splice variants
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DB built by FlyBase

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Gene: zyd FBgn0265767

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Description

zydeco

Gene Synonyms

Location

Primary_assembly X: 23,022,898-23,035,550 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 7 transcripts (splice variants), 46 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
zyd-RF	FBtr0301133	2094	542aa	FBpp0290356	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJX8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
zyd-RG	FBtr0340198	3164	499aa	FBpp0309173	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A021WZA4	-	-
zyd-RI	FBtr0347557	2794	463aa	FBpp0312590	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJX7	-	-
zyd-RD	FBtr0113769	2460	463aa	FBpp0112492	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJX7	-	-
zyd-RH	FBtr0340199	2341	463aa	FBpp0309174	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJX7	-	-
zyd-RA	FBtr0113768	2172	526aa	FBpp0112491	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7PLW1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
zyd-RE	FBtr0301132	2006	535aa	FBpp0290355	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXS9	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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